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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
8
ATAC-seq
7
total RNA-seq
4
Hi-C
1
WGBS
Assay category
8
DNA accessibility
7
Transcription
4
3D chromatin structure
1
DNA methylation
Date released
6
February, 2021
6
October, 2019
5
July, 2019
3
February, 2020
Available data
49
bam
44
bed narrowPeak
43
bigWig
36
bed bed3+
36
bed broadPeak
bigBed broadPeak
36
bigBed narrowPeak
7
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
20
Homo sapiens
Biosample type
20
tissue
Organ
513
connective tissue
410
adipose tissue
399
pancreas
229
heart
224
kidney
224
liver
194
epithelium
159
bone element
123
vasculature
122
blood vessel
103
artery
52
eye
35
brain
22
musculature of body
20
limb
20
lung
16
skeleton
10
embryo
9
blood
9
bodily fluid
6
nerve
3
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
20
AMP
Genome assembly (visualization)
13
GRCh38
12
hg19
Lab
20
AMP-T2D consortium
files.file_type!
bigBed broadPeak
fastq
assay_title!
ChIP-seq
BIOSAMPLE
ASSAY
20 results
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ATAC-seq
total RNA-seq
Hi-C
WGBS
tissue
tibial nerve
1
5
gastrocnemius medialis
1
4
tibial artery
1
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
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