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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
19
total RNA-seq
ChIP-seq
4
pCHi-C
1
RRBS
Assay category
28
DNA accessibility
19
Transcription
1
DNA methylation
Date released
31
February, 2023
19
October, 2019
1
February, 2020
1
July, 2019
Available data
31
bed narrowPeak
5
tsv
4
bam
4
bed bed3+
4
bed broadPeak
bigBed broadPeak
4
bigBed narrowPeak
4
bigWig
1
bed bedMethyl
1
bigBed bedMethyl
Organism
52
Homo sapiens
Biosample type
51
tissue
1
primary cell
Organ
721
pancreas
522
connective tissue
416
adipose tissue
379
epithelium
234
liver
229
heart
224
kidney
159
bone element
123
vasculature
122
blood vessel
103
artery
52
eye
36
brain
24
musculature of body
20
limb
20
lung
16
skeleton
15
embryo
9
blood
9
bodily fluid
6
nerve
4
spleen
3
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
52
AMP
Genome assembly (visualization)
28
hg19
Lab
52
AMP-T2D consortium
files.file_type!
bigBed broadPeak
assay_title!
ChIP-seq
BIOSAMPLE
ASSAY
52 results
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ATAC-seq
total RNA-seq
pCHi-C
RRBS
tissue
islet of Langerhans
1
14
4
retina
15
3
pigmented layer of retina
12
2
primary cell
retinal pigment epithelial cell
1
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