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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
RRBS
17
WGBS
2
pCHi-C
Assay category
17
DNA methylation
Date released
8
July, 2019
7
November, 2018
2
August, 2017
2
March, 2020
Available data
3392
bam
3169
bigWig
1817
bed narrowPeak
1600
tsv
1354
fastq
1042
bigBed narrowPeak
398
tagAlign
322
bed broadPeak
bigBed broadPeak
273
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
23
bedpe bed3+
23
hic
17
bed bedMethyl
17
bigBed bedMethyl
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
19
Homo sapiens
Biosample type
16
tissue
2
in vitro differentiated cells
1
cell line
Organ
6
heart
4
pancreas
2
adipose tissue
2
connective tissue
2
spleen
1
blood vessel
1
limb
1
liver
1
musculature of body
1
vasculature
Project
19
AMP
Genome assembly (visualization)
17
GRCh38
2
hg19
Lab
19
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
files.file_type!
bigBed broadPeak
assay_title!
RRBS
BIOSAMPLE
ASSAY
19 results
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Clear Filters
WGBS
pCHi-C
tissue
adipose tissue
2
body of pancreas
2
heart left ventricle
2
heart right ventricle
2
pancreas
2
+ See 5 more…
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
cell line
HepG2
1
See all biosamples
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