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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
122
ChIP-seq
total RNA-seq
29
ATAC-seq
17
pCHi-C
1
DNAme array
Assay category
122
DNA binding
29
DNA accessibility
1
DNA methylation
Target of assay
119
histone
119
histone modification
66
broad histone mark
53
narrow histone mark
3
control
Date released
342
November, 2017
269
October, 2019
240
August, 2017
210
August, 2021
174
May, 2022
169
May, 2021
166
February, 2021
151
May, 2020
120
May, 2019
100
February, 2023
80
April, 2019
79
November, 2018
74
October, 2018
64
July, 2019
51
December, 2017
48
July, 2018
47
September, 2018
47
September, 2023
43
April, 2018
43
March, 2020
43
September, 2020
36
November, 2019
35
December, 2018
31
June, 2019
25
January, 2019
23
October, 2017
19
April, 2020
16
January, 2021
14
May, 2023
11
November, 2020
11
September, 2017
7
August, 2020
5
March, 2019
5
March, 2023
4
January, 2018
4
October, 2022
3
August, 2018
3
December, 2019
3
June, 2018
1
August, 2022
Available data
128
bed narrowPeak
118
bigWig
98
bam
84
tagAlign
Organism
169
Homo sapiens
Biosample type
151
primary cell
in vitro differentiated cells
17
cell line
1
tissue
Organ
17
epithelium
17
pancreas
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
102
T1D
67
AMP
Genome assembly (visualization)
131
hg19
98
GRCh38
Lab
134
Kyle Gaulton, UCSD
35
AMP-T2D consortium
Audit category:
18
inconsistent ontology term
files.file_type!
bigBed broadPeak
biosample_type!
in vitro differentiated cells
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
169 results
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Clear Filters
ChIP-seq
ATAC-seq
pCHi-C
DNAme array
primary cell
monocyte
85
13
1
1
CD8-positive, alpha-beta T cell
33
1
naive thymus-derived CD4-positive, alpha-beta T cell
2
1
CD4-positive, alpha-beta T cell
2
neutrophil
1
1
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cell line
EndoC_BH1
1
16
tissue
thymus
1
See all biosamples
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