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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
MeRIP-seq
6
ATAC-seq
6
ChIP-seq
4
total RNA-seq
Assay category
6
DNA accessibility
6
DNA binding
4
Transcription
Target of assay
11
control
5
nucleotide modification
Date released
689
February, 2021
342
November, 2017
341
May, 2020
329
August, 2017
297
October, 2019
277
August, 2021
267
May, 2021
200
May, 2022
189
February, 2023
168
July, 2018
120
May, 2019
108
July, 2019
80
April, 2019
79
November, 2018
76
October, 2018
73
September, 2018
59
September, 2020
56
March, 2020
56
November, 2019
51
December, 2017
49
April, 2018
47
September, 2023
35
December, 2018
31
June, 2019
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
15
November, 2020
11
September, 2017
8
December, 2019
7
August, 2020
5
March, 2019
5
March, 2023
4
January, 2018
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
17
bam
11
fastq
10
bigWig
7
bed narrowPeak
6
bigBed narrowPeak
4
tsv
3
bed bed3+
1
bed broadPeak
bigBed broadPeak
Organism
26
Homo sapiens
Biosample type
10
primary cell
10
tissue
6
cell line
Organ
21
pancreas
11
epithelium
5
connective tissue
Project
26
AMP
Genome assembly (visualization)
12
GRCh38
12
hg19
Lab
16
AMP-T2D consortium
10
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
6
inconsistent ontology term
files.file_type!
bigBed broadPeak
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
26 results
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Clear Filters
MeRIP-seq
ATAC-seq
ChIP-seq
total RNA-seq
primary cell
osteoblast
1
4
pancreatic alpha cell
2
pancreatic beta cell
2
pancreatic acinar cell
1
tissue
islet of Langerhans
4
6
cell line
EndoC_BH1
6
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