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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
90
ChIP-seq
Assay category
90
DNA binding
Target of assay
184
histone
184
histone modification
94
narrow histone mark
90
broad histone mark
5
RNA binding protein
5
transcription factor
3
control
Date released
44
May, 2021
17
September, 2018
10
August, 2017
8
June, 2019
8
October, 2019
2
May, 2019
1
August, 2021
Available data
96
bam
96
bigWig
92
bed narrowPeak
51
tagAlign
33
fastq
21
bigBed narrowPeak
6
bed broadPeak
bigBed broadPeak
1
bed bed3+
Organism
90
Homo sapiens
Biosample type
242
tissue
90
primary cell
37
in vitro differentiated cells
9
cell line
1
stem cell
Organ
27
epithelium
27
pancreas
5
blood vessel
5
kidney
5
vasculature
5
vein
4
connective tissue
4
musculature of body
1
liver
Project
46
AMP
44
T1D
Genome assembly (visualization)
110
hg19
90
GRCh38
Lab
46
AMP-T2D consortium
44
Kyle Gaulton, UCSD
Audit category:
8
inconsistent ontology term
Audit category:
21
missing controlled_by
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
90 results
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ChIP-seq
primary cell
monocyte
44
pancreatic endocrine cell
11
pancreatic ductal cell
6
endothelial cell of umbilical vein
5
mesenchymal stem cell
4
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