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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
377
ChIP-seq
4
FAIRE-seq
3
ATAC-seq
1
DNase-seq
Assay category
377
DNA binding
8
DNA accessibility
Target of assay
312
histone
312
histone modification
204
broad histone mark
108
narrow histone mark
65
transcription factor
20
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
Date released
93
May, 2019
64
April, 2019
57
November, 2017
45
October, 2018
43
October, 2019
36
December, 2017
22
August, 2017
8
November, 2018
6
January, 2019
6
October, 2017
3
December, 2018
2
July, 2019
Available data
1907
bam
1772
bigWig
1076
tsv
984
bed narrowPeak
561
bigBed narrowPeak
377
fastq
238
tagAlign
213
bed broadPeak
205
bed bed3+
bigBed broadPeak
157
txt
64
xls
25
bed bedMethyl
25
bigBed bedMethyl
11
hic
10
bedpe bed3+
6
csv
5
bed bed3
1
bedpe
1
tagAlign bed3+
Organism
379
Homo sapiens
Biosample type
385
tissue
302
cell line
62
primary cell
16
in vitro differentiated cells
Organ
89
brain
61
heart
57
blood vessel
57
vasculature
56
pancreas
48
limb
46
liver
24
nerve
21
artery
19
kidney
12
spleen
8
adipose tissue
8
connective tissue
6
musculature of body
Project
385
AMP
Genome assembly (visualization)
379
GRCh38
333
hg19
Lab
385
AMP-T2D consortium
Audit category:
27
inconsistent control
Audit category:
3
missing controlled_by
Audit category:
6
inconsistent control read length
1
inconsistent assembly
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
385 results
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Clear Filters
ChIP-seq
FAIRE-seq
ATAC-seq
DNase-seq
tissue
liver
38
heart left ventricle
28
body of pancreas
26
tibial nerve
24
kidney
18
1
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