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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
ChIP-seq
1
DNase-seq
1
FAIRE-seq
Assay category
24
DNA binding
2
DNA accessibility
Target of assay
22
histone
22
histone modification
12
broad histone mark
10
narrow histone mark
2
RNA binding protein
2
transcription factor
Date released
18
April, 2019
4
May, 2019
2
June, 2019
1
July, 2019
1
October, 2019
Available data
183
bed narrowPeak
144
bam
131
bigWig
104
bigBed narrowPeak
78
bed bed3+
78
bed broadPeak
bigBed broadPeak
64
xls
62
txt
24
tsv
5
csv
4
bed bedMethyl
4
bigBed bedMethyl
1
hic
Organism
26
Homo sapiens
Biosample type
19
tissue
6
primary cell
1
cell line
Organ
301
liver
89
brain
84
pancreas
68
blood vessel
68
vasculature
64
heart
56
epithelium
54
blood
54
bodily fluid
48
limb
26
kidney
24
nerve
21
artery
19
connective tissue
14
musculature of body
12
spleen
11
vein
8
adipose tissue
2
eye
Project
26
AMP
Genome assembly (visualization)
26
hg19
25
GRCh38
Lab
26
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
26 results
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Clear Filters
ChIP-seq
DNase-seq
FAIRE-seq
tissue
kidney
18
1
primary cell
kidney epithelial cell
4
epithelial cell of proximal tubule
2
cell line
glomerular visceral epithelial cell
1
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