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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
48
single cell RNA-seq
34
ChIP-seq
2
total RNA-seq
1
Hi-C
Assay category
50
Transcription
34
DNA binding
1
3D chromatin structure
Target of assay
28
transcription factor
4
control
2
RNA binding protein
2
chromatin remodeller
Date released
272
August, 2017
260
November, 2017
94
December, 2017
79
November, 2018
76
February, 2023
73
September, 2018
60
October, 2018
50
July, 2018
45
February, 2021
44
April, 2018
41
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
24
May, 2022
17
October, 2017
11
September, 2017
7
August, 2020
5
January, 2018
4
August, 2018
3
June, 2018
1
March, 2019
Available data
198
bam
194
bigWig
164
tsv
85
fastq
30
bed narrowPeak
30
bigBed narrowPeak
Organism
85
Homo sapiens
Biosample type
48
primary cell
28
cell line
9
tissue
Organ
39
pancreas
33
epithelium
27
blood
27
bodily fluid
7
spleen
2
connective tissue
1
liver
Project
85
AMP
Genome assembly (visualization)
80
GRCh38
80
hg19
Lab
85
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
1
inconsistent control
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
85 results
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single cell RNA-seq
ChIP-seq
total RNA-seq
Hi-C
primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
pancreatic acinar cell
5
pancreatic delta cell
4
pancreatic cell
3
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cell line
GM12878
27
HepG2
1
tissue
spleen
7
islet of Langerhans
2
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