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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
120
ChIP-seq
10
MeRIP-seq
4
total RNA-seq
1
ATAC-seq
Assay category
120
DNA binding
4
Transcription
1
DNA accessibility
Target of assay
92
histone
92
histone modification
58
broad histone mark
34
narrow histone mark
28
control
5
RNA binding protein
5
nucleotide modification
5
transcription factor
Date released
715
February, 2021
399
May, 2021
396
August, 2017
342
November, 2017
341
May, 2020
319
August, 2021
305
October, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
80
April, 2019
79
November, 2018
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
31
June, 2019
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
15
November, 2020
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
126
bam
102
bigWig
99
bed narrowPeak
98
bigBed narrowPeak
4
tsv
1
bed bed3+
1
bed broadPeak
bigBed broadPeak
Organism
135
Homo sapiens
Biosample type
119
tissue
10
primary cell
6
cell line
Organ
50
blood vessel
50
vasculature
28
brain
21
heart
12
pancreas
11
epithelium
7
limb
7
musculature of body
5
artery
5
connective tissue
5
kidney
Project
135
AMP
Genome assembly (visualization)
102
hg19
101
GRCh38
Lab
125
AMP-T2D consortium
10
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
9
inconsistent ontology term
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
135 results
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Clear Filters
ChIP-seq
MeRIP-seq
total RNA-seq
ATAC-seq
tissue
ascending aorta
16
thoracic aorta
16
temporal lobe
15
angular gyrus
13
aorta
13
+ See 7 more…
primary cell
kidney epithelial cell
5
osteoblast
4
1
cell line
EndoC_BH1
6
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