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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
69
ChIP-seq
Assay category
69
DNA binding
Target of assay
54
histone
54
histone modification
29
narrow histone mark
25
broad histone mark
18
transcription factor
6
chromatin remodeller
RNA binding protein
1
recombinant protein
Date released
32
September, 2018
21
August, 2017
8
November, 2017
4
October, 2017
3
November, 2018
1
December, 2017
Available data
69
fastq
68
bam
66
bigWig
46
bed narrowPeak
13
bigBed narrowPeak
9
bed bed3+
4
tagAlign
2
bed broadPeak
Organism
69
Homo sapiens
Biosample type
44
primary cell
13
tissue
11
cell line
1
in vitro differentiated cells
Organ
53
pancreas
21
epithelium
connective tissue
12
adipose tissue
11
liver
4
brain
1
embryo
Project
69
AMP
Genome assembly (visualization)
66
hg19
60
GRCh38
Lab
69
AMP-T2D consortium
Audit category:
69
missing controlled_by
Audit category:
4
inconsistent control run_type
3
inconsistent control read length
files.file_type!
bigBed broadPeak
organ_slims!
connective tissue
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
69 results
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Clear Filters
ChIP-seq
primary cell
pancreatic endocrine cell
23
pancreatic ductal cell
13
pancreatic acinar cell
8
tissue
islet of Langerhans
9
brain
4
cell line
HepG2
11
in vitro differentiated cells
pancreatic endoderm
1
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