Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1732
ChIP-seq
922
total RNA-seq
434
ATAC-seq
292
single cell RNA-seq
69
WGBS
53
pCHi-C
51
snATAC-seq
33
Hi-C
17
RRBS
17
small RNA-seq
10
MeRIP-seq
5
GRO-seq
4
Capture-C
4
FAIRE-seq
3
CRISPR genome editing followed by DNA sequencing
3
DNase-seq
3
STARR-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
RNA microarray
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
4
DNA accessibility
Date released
1
August, 2017
1
July, 2019
1
November, 2018
1
October, 2019
Available data
4
bam
4
bed narrowPeak
4
bigBed narrowPeak
4
bigWig
2
fastq
1
tar
Organism
4
Homo sapiens
Biosample type
3
tissue
1
primary cell
Organ
2
pancreas
1
blood vessel
1
brain
1
epithelium
kidney
1
vasculature
1
vein
Project
4
AMP
Genome assembly (visualization)
4
hg19
Lab
4
AMP-T2D consortium
files.file_type!
bigBed broadPeak
organ_slims!
kidney
month_released!
February, 2021
BIOSAMPLE
ASSAY
4 results
search-icon
table-tab-icon
Clear Filters
FAIRE-seq
tissue
frontal cortex
1
islet of Langerhans
1
pancreas
1
primary cell
endothelial cell of umbilical vein
1
Download