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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
2
WGBS
1
ATAC-seq
1
pCHi-C
Assay category
20
DNA binding
2
DNA methylation
1
DNA accessibility
Target of assay
8
control
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
8
November, 2018
7
December, 2018
7
January, 2019
1
March, 2020
1
October, 2017
Available data
24
bam
24
fastq
16
bigWig
14
bed narrowPeak
13
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
bigBed broadPeak
1
tsv
Organism
24
Homo sapiens
Biosample type
24
tissue
Organ
922
pancreas
721
liver
671
connective tissue
488
adipose tissue
471
epithelium
355
heart
246
kidney
178
vasculature
176
blood vessel
162
brain
159
bone element
113
artery
69
blood
69
bodily fluid
63
musculature of body
37
embryo
36
eye
24
spleen
21
limb
20
lung
16
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
large intestine
1
mammary gland
1
nerve
1
ovary
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
1
vein
Project
24
AMP
Genome assembly (visualization)
15
GRCh38
13
hg19
Lab
24
AMP-T2D consortium
files.file_type!
bigBed broadPeak
organ_slims!
large intestine
month_released!
October, 2019
BIOSAMPLE
ASSAY
24 results
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ChIP-seq
WGBS
ATAC-seq
pCHi-C
tissue
spleen
20
2
1
1
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