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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
ChIP-seq
22
ATAC-seq
2
FAIRE-seq
1
DNase-seq
Assay category
59
DNA binding
25
DNA accessibility
Target of assay
49
histone
49
histone modification
30
broad histone mark
19
narrow histone mark
10
transcription factor
6
RNA binding protein
Date released
40
October, 2018
17
August, 2017
14
September, 2018
6
October, 2019
5
September, 2017
1
May, 2019
1
November, 2018
Available data
689
bam
623
bigWig
471
fastq
417
tsv
214
bed narrowPeak
91
bigBed narrowPeak
80
zippedFastqFolder
29
bed bed3+
21
bed broadPeak
19
tagAlign
7
bedpe bed3+
bigBed broadPeak
7
hic
6
bed bedMethyl
6
bigBed bedMethyl
6
txt
3
cool
1
bedpe
1
hdf5
Organism
78
Homo sapiens
Biosample type
56
tissue
22
primary cell
6
cell line
Organ
301
liver
89
brain
84
pancreas
68
blood vessel
68
vasculature
64
heart
56
epithelium
54
blood
54
bodily fluid
48
limb
26
kidney
24
nerve
21
artery
19
connective tissue
14
musculature of body
12
spleen
11
vein
8
adipose tissue
2
eye
Project
84
AMP
Genome assembly (visualization)
84
hg19
82
GRCh38
Lab
84
AMP-T2D consortium
Audit category:
5
inconsistent control read length
1
inconsistent assembly
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
84 results
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Clear Filters
ChIP-seq
ATAC-seq
FAIRE-seq
DNase-seq
tissue
body of pancreas
26
endocrine pancreas
14
pancreas
13
1
islet of Langerhans
1
1
primary cell
pancreatic beta cell
7
pancreatic alpha cell
6
pancreatic acinar cell
5
pancreatic ductal cell
4
cell line
Panc1
6
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