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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
ChIP-seq
Assay category
9
DNA binding
Target of assay
23
transcription factor
20
histone
20
histone modification
12
chromatin remodeller
11
narrow histone mark
9
broad histone mark
4
RNA binding protein
1
recombinant protein
Date released
5
December, 2017
3
August, 2017
1
February, 2018
Available data
15
bam
15
bigWig
15
fastq
14
bed narrowPeak
8
bigBed narrowPeak
6
bed broadPeak
bigBed broadPeak
6
tagAlign
5
bed bed3+
Organism
9
Homo sapiens
Biosample type
5
in vitro differentiated cells
3
tissue
1
stem cell
Organ
3
pancreas
1
embryo
Project
9
AMP
Genome assembly (visualization)
9
GRCh38
9
hg19
Lab
9
AMP-T2D consortium
Audit category:
9
inconsistent control read length
1
inconsistent assembly
files.file_type!
bigBed broadPeak
award.project!
T1D
BIOSAMPLE
ASSAY
9 results
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ChIP-seq
in vitro differentiated cells
definitive endodermal cell
2
Posterior foregut
1
pancreatic endoderm
1
primitive gut cell
1
tissue
pancreas
3
stem cell
hESC
1
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