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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
Assay category
70
DNA binding
Target of assay
137
histone
137
histone modification
70
broad histone mark
67
narrow histone mark
35
control
5
RNA binding protein
5
transcription factor
Date released
22
May, 2021
17
September, 2018
10
August, 2017
10
October, 2019
8
June, 2019
2
May, 2019
1
August, 2021
Available data
74
bigWig
68
bed narrowPeak
56
bam
33
fastq
21
bigBed narrowPeak
8
bed broadPeak
bigBed broadPeak
7
tagAlign
1
bed bed3+
Organism
70
Homo sapiens
Biosample type
303
tissue
70
primary cell
56
in vitro differentiated cells
11
cell line
1
stem cell
Organ
29
epithelium
27
pancreas
7
blood vessel
7
vasculature
7
vein
5
kidney
4
connective tissue
4
musculature of body
1
liver
Project
70
AMP
T1D
Genome assembly (visualization)
66
hg19
46
GRCh38
Lab
50
AMP-T2D consortium
20
Kyle Gaulton, UCSD
Audit category:
8
inconsistent ontology term
Audit category:
21
missing controlled_by
files.file_type!
bigBed broadPeak
award.project!
T1D
BIOSAMPLE
ASSAY
70 results
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ChIP-seq
primary cell
CD8-positive, alpha-beta T cell
20
pancreatic endocrine cell
11
endothelial cell of umbilical vein
7
pancreatic ductal cell
6
mesenchymal stem cell
4
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