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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
97
ChIP-seq
Assay category
97
DNA binding
Target of assay
176
histone modification
175
histone
97
broad histone mark
77
narrow histone mark
48
control
26
transcription factor
4
RNA binding protein
2
chromatin remodeller
Date released
97
August, 2017
76
May, 2021
58
May, 2019
53
October, 2019
42
November, 2017
37
April, 2019
20
May, 2024
19
October, 2018
17
September, 2018
10
December, 2017
10
October, 2017
8
August, 2021
8
February, 2018
8
June, 2019
6
November, 2019
4
January, 2019
Available data
61
bigWig
56
bed narrowPeak
49
bam
49
fastq
45
tagAlign
22
bed broadPeak
18
bigBed narrowPeak
bed bed3+
bigBed broadPeak
Organism
93
Homo sapiens
Biosample type
67
tissue
20
in vitro differentiated cells
10
primary cell
Organ
40
connective tissue
26
pancreas
20
adipose tissue
19
liver
12
musculature of body
6
epithelium
Project
97
AMP
Genome assembly (visualization)
49
hg19
37
GRCh38
Lab
97
AMP-T2D consortium
Audit category:
4
missing controlled_by
Audit category:
3
inconsistent control read length
1
inconsistent assembly
files.file_type!
bigBed broadPeak
bed bed3+
BIOSAMPLE
ASSAY
97 results
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Clear Filters
ChIP-seq
tissue
subcutaneous abdominal adipose tissue
20
liver
19
skeletal muscle tissue
12
islet of Langerhans
8
pancreas
8
in vitro differentiated cells
adipocyte
20
primary cell
pancreatic endocrine cell
4
pancreatic alpha cell
3
pancreatic beta cell
3
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