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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
164
ChIP-seq
Assay category
164
DNA binding
Target of assay
299
histone
299
histone modification
164
narrow histone mark
135
broad histone mark
68
control
9
transcription factor
Date released
41
May, 2021
40
October, 2019
27
May, 2020
24
August, 2017
21
November, 2017
9
August, 2021
2
October, 2017
Available data
425
bigWig
414
bed narrowPeak
405
bam
174
tagAlign
149
bigBed narrowPeak
110
fastq
29
bed broadPeak
bigBed broadPeak
13
bed bed3+
1
tagAlign bed3+
Organism
162
Homo sapiens
Biosample type
110
tissue
42
primary cell
12
in vitro differentiated cells
Organ
54
brain
35
liver
7
connective tissue
7
pancreas
5
musculature of body
3
adipose tissue
3
epithelium
1
pituitary gland
Project
124
AMP
40
T1D
Genome assembly (visualization)
132
hg19
126
GRCh38
Lab
124
AMP-T2D consortium
40
Kyle Gaulton, UCSD
Audit category:
1
missing controlled_by
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
164 results
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Clear Filters
ChIP-seq
tissue
liver
33
substantia nigra
6
caudate nucleus
5
cingulate gyrus
5
layer of hippocampus
5
+ See 43 more…
primary cell
monocyte
40
hepatocyte
2
in vitro differentiated cells
neural progenitor cell
7
adipocyte
4
pancreatic PP cell
1
See all biosamples
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