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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
73
ChIP-seq
Assay category
73
DNA binding
Target of assay
56
control
17
histone
17
histone modification
10
broad histone mark
7
narrow histone mark
Date released
August, 2017
23
May, 2020
21
November, 2017
9
October, 2019
8
August, 2021
8
October, 2017
3
February, 2021
1
May, 2021
Available data
2731
bam
bigWig
1497
tsv
1193
bed narrowPeak
978
fastq
769
bigBed narrowPeak
313
tagAlign
157
txt
93
zippedFastqFolder
75
bed broadPeak
66
bigBed broadPeak
31
bed bed3+
30
bed bedMethyl
30
bigBed bedMethyl
23
bedpe bed3+
23
hic
8
csv
5
hdf5
3
cool
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
73
Homo sapiens
Biosample type
61
tissue
8
in vitro differentiated cells
3
cell line
1
primary cell
Organ
36
brain
24
liver
2
artery
2
blood vessel
2
epithelium
2
heart
2
vasculature
1
pancreas
Project
73
AMP
Genome assembly (visualization)
1
GRCh38
Lab
73
AMP-T2D consortium
Audit category:
1
missing controlled_by
files.file_type!
bigWig
assay_slims!
DNA accessibility
month_released!
August, 2017
BIOSAMPLE
ASSAY
73 results
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ChIP-seq
tissue
liver
23
brain
8
cingulate gyrus
8
layer of hippocampus
4
substantia nigra
4
+ See 11 more…
in vitro differentiated cells
neural progenitor cell
7
pancreatic PP cell
1
cell line
smooth muscle cell of the coronary artery
2
iPSC derived cell line
1
primary cell
hepatocyte
1
See all biosamples
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