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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
6
single cell RNA-seq
3
ChIP-seq
3
snDrop-seq
2
pCHi-C
Assay category
DNA accessibility
6
Transcription
3
DNA binding
Target of assay
3
control
Date released
192
August, 2021
102
August, 2017
98
February, 2021
95
May, 2022
88
October, 2019
67
May, 2021
47
September, 2023
44
March, 2020
26
May, 2020
25
February, 2020
25
November, 2017
24
February, 2023
23
July, 2019
23
May, 2019
18
September, 2020
15
April, 2019
10
November, 2020
9
April, 2020
8
June, 2019
6
October, 2017
5
December, 2019
5
March, 2023
4
July, 2018
4
May, 2023
4
November, 2019
4
October, 2022
2
October, 2018
1
March, 2019
Available data
559
tsv
554
bam
bigWig
89
txt
fastq
8
tagAlign
6
csv
5
bed narrowPeak
2
bed bed3+
Organism
98
Homo sapiens
Biosample type
93
tissue
4
cell line
1
primary cell
Organ
84
bone element
8
kidney
2
artery
2
blood vessel
2
heart
2
liver
2
vasculature
1
connective tissue
Project
98
AMP
Genome assembly (visualization)
2
hg19
Lab
98
AMP-T2D consortium
Audit category:
84
inconsistent ontology term
5
audit script error
files.file_type!
bigWig
fastq
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
98 results
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RNA microarray
single cell RNA-seq
ChIP-seq
snDrop-seq
pCHi-C
tissue
bone element
84
kidney
5
kidney (Cortex-Medulla)
1
kidney (cortex)
1
kidney (medulla)
1
+ See 1 more…
cell line
smooth muscle cell of the coronary artery
2
HepG2
1
iPSC derived cell line
1
primary cell
osteoblast
1
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