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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
42
ChIP-seq
17
pCHi-C
7
total RNA-seq
1
DNAme array
Assay category
42
DNA binding
DNA accessibility
7
Transcription
1
DNA methylation
Target of assay
24
histone
24
histone modification
12
broad histone mark
12
narrow histone mark
12
transcription factor
6
control
5
RNA binding protein
Date released
192
August, 2021
138
August, 2017
116
February, 2021
101
May, 2022
96
February, 2023
88
October, 2019
72
November, 2017
67
May, 2021
56
September, 2020
47
September, 2023
44
March, 2020
29
October, 2018
26
May, 2020
25
February, 2020
23
July, 2019
23
May, 2019
22
December, 2017
15
April, 2019
10
November, 2020
9
April, 2020
9
October, 2017
8
February, 2018
8
June, 2019
8
November, 2018
6
September, 2017
5
December, 2018
5
December, 2019
5
March, 2023
4
January, 2019
4
July, 2018
4
May, 2023
4
November, 2019
4
October, 2022
1
August, 2018
1
March, 2019
1
September, 2018
Available data
bigWig
264
bam
173
tsv
120
bed narrowPeak
90
tagAlign
2
bed bed3+
Organism
67
Homo sapiens
Biosample type
43
in vitro differentiated cells
22
primary cell
2
tissue
Organ
2
pancreas
1
bone element
1
bone marrow
1
connective tissue
1
epithelium
1
thymus
Project
50
AMP
17
T1D
Lab
60
Kyle Gaulton, UCSD
7
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
bigWig
assay_slims!
DNA accessibility
organ_slims!
skeleton
BIOSAMPLE
ASSAY
67 results
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Clear Filters
ChIP-seq
pCHi-C
total RNA-seq
DNAme array
in vitro differentiated cells
embryonic stem cell
37
5
pancreatic PP cell
1
primary cell
monocyte
1
1
1
1
naive thymus-derived CD4-positive, alpha-beta T cell
2
1
CD4-positive, alpha-beta T cell
2
neutrophil
1
1
B cell
1
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tissue
pancreas
1
thymus
1
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