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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
ChIP-seq
2
Hi-C
1
pCHi-C
Assay category
9
DNA binding
2
3D chromatin structure
Target of assay
7
histone
7
histone modification
5
narrow histone mark
2
broad histone mark
2
control
Date released
10
October, 2019
2
March, 2020
Available data
20
bam
bigWig
13
bed narrowPeak
13
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
2
bed bed3+
2
hic
1
bedpe bed3+
1
tar
1
tsv
Organism
12
Homo sapiens
Biosample type
7
primary cell
5
tissue
Organ
323
pancreas
222
epithelium
221
kidney
169
heart
169
liver
113
connective tissue
81
vasculature
80
blood vessel
65
adipose tissue
64
brain
56
artery
55
eye
31
limb
28
musculature of body
20
lung
17
bone element
16
skeleton
14
blood
14
bodily fluid
12
nerve
9
spleen
8
embryo
7
vein
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
12
AMP
Genome assembly (visualization)
2
hg19
Lab
12
AMP-T2D consortium
Audit category:
1
audit script error
files.file_type!
bigWig
assay_title!
RNA microarray
BIOSAMPLE
ASSAY
12 results
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Clear Filters
ChIP-seq
Hi-C
pCHi-C
primary cell
endothelial cell of umbilical vein
5
2
tissue
islet of Langerhans
4
ovary
1
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