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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ATAC-seq
17
pCHi-C
4
ChIP-seq
2
total RNA-seq
1
DNAme array
Assay category
29
DNA accessibility
4
DNA binding
2
Transcription
1
DNA methylation
Target of assay
4
histone
4
histone modification
2
broad histone mark
2
narrow histone mark
Date released
252
August, 2021
189
February, 2023
180
May, 2022
160
February, 2021
119
August, 2017
103
October, 2019
81
May, 2020
72
November, 2017
56
September, 2020
53
May, 2021
47
September, 2023
38
March, 2020
29
October, 2018
25
February, 2020
25
November, 2019
23
July, 2019
23
May, 2019
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
13
December, 2017
11
November, 2020
9
October, 2017
8
June, 2019
8
November, 2018
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
4
January, 2019
4
July, 2018
4
October, 2022
3
December, 2019
1
August, 2022
1
September, 2018
Available data
bigWig
192
bam
128
bed narrowPeak
94
tsv
84
tagAlign
2
bed bed3+
Organism
53
Homo sapiens
Biosample type
in vitro differentiated cells
35
primary cell
16
cell line
2
tissue
Organ
17
pancreas
16
epithelium
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
36
AMP
17
T1D
Genome assembly (visualization)
13
GRCh38
13
hg19
Lab
35
AMP-T2D consortium
18
Kyle Gaulton, UCSD
Audit category:
17
inconsistent ontology term
files.file_type!
bigWig
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
53 results
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Clear Filters
ATAC-seq
pCHi-C
ChIP-seq
total RNA-seq
DNAme array
primary cell
monocyte
13
1
1
1
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
2
CD4-positive, alpha-beta T cell
2
neutrophil
1
1
B cell
1
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cell line
EndoC_BH1
16
tissue
pancreas
1
thymus
1
See all biosamples
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