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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
ATAC-seq
Assay category
83
DNA binding
25
DNA accessibility
11
Transcription
4
3D chromatin structure
Date released
10
August, 2021
5
November, 2019
4
February, 2021
4
February, 2023
2
October, 2019
Available data
22
bed narrowPeak
18
bam
bigWig
7
bed bedgraph
bed bed3
4
bed bed3+
3
bigBed narrowPeak
3
txt
1
bed broadPeak
1
bigBed broadPeak
1
fastq
Organism
25
Homo sapiens
Biosample type
241
tissue
180
primary cell
25
cell line
25
in vitro differentiated cells
Organ
8
connective tissue
Project
25
AMP
Genome assembly (visualization)
25
hg19
17
GRCh38
Lab
25
AMP-T2D consortium
Audit category:
9
inconsistent ontology term
files.file_type!
bigWig
bed bed3
BIOSAMPLE
ASSAY
25 results
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ATAC-seq
in vitro differentiated cells
neural progenitor cell
10
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
adipocyte
5
immature adipocyte
2
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
preadipocyte
1
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