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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
173
ATAC-seq
1
ChIP-seq
Assay category
173
DNA accessibility
1
DNA binding
Target of assay
1
broad histone mark
1
histone
1
histone modification
Date released
64
August, 2021
63
February, 2023
20
November, 2019
18
May, 2022
8
February, 2021
1
November, 2017
Available data
1907
bam
bigWig
1076
tsv
944
bed narrowPeak
561
bigBed narrowPeak
377
fastq
238
tagAlign
213
bed broadPeak
205
bed bed3+
176
bigBed broadPeak
157
txt
64
xls
25
bed bedMethyl
25
bigBed bedMethyl
11
hic
10
bedpe bed3+
6
csv
5
bed bed3
1
bedpe
1
tagAlign bed3+
Organism
174
Homo sapiens
Biosample type
174
tissue
17
in vitro differentiated cells
16
primary cell
10
cell line
Organ
64
kidney
37
pancreas
35
artery
35
blood vessel
35
heart
35
vasculature
27
eye
12
epithelium
8
bone element
8
skeleton
6
limb
2
adipose tissue
2
connective tissue
1
brain
Project
174
AMP
Genome assembly (visualization)
128
GRCh38
74
hg19
Lab
92
AMP-T2D consortium
64
Katalin Susztak, Upenn
18
Kyle Gaulton, UCSD
Audit category:
1
inconsistent ontology term
files.file_type!
bigWig
BIOSAMPLE
ASSAY
174 results
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ATAC-seq
ChIP-seq
tissue
kidney
64
islet of Langerhans
37
coronary artery
35
retina
15
pigmented layer of retina
12
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