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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
total RNA-seq
4
ChIP-seq
2
STARR-seq
1
Hi-C
1
whole genome sequencing assay
Assay category
29
Transcription
4
DNA binding
1
3D chromatin structure
1
DNA sequencing
Target of assay
4
control
Date released
20
May, 2022
17
August, 2021
Available data
34
bed narrowPeak
bigWig
9
tsv
1
bedpe bed3+
1
hic
1
vcf
Organism
37
Homo sapiens
Biosample type
20
tissue
17
cell line
Organ
210
pancreas
191
kidney
148
epithelium
37
liver
19
lung
8
blood
8
bodily fluid
3
connective tissue
1
bone element
1
bone marrow
1
thymus
Project
37
AMP
Genome assembly (visualization)
1
hg19
Lab
AMP-T2D consortium
20
Karen Mohlke, UNC
17
Bing Ren, UCSD
files.file_type!
bigWig
lab.title!
AMP-T2D consortium
assay_title!
CRISPR RNA-seq
BIOSAMPLE
ASSAY
37 results
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total RNA-seq
ChIP-seq
STARR-seq
Hi-C
whole genome sequencing assay
tissue
liver
20
cell line
HepG2
9
4
2
1
1
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