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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
75
ATAC-seq
69
total RNA-seq
11
single cell RNA-seq
6
snATAC-seq
1
Hi-C
Assay category
81
DNA accessibility
80
Transcription
1
3D chromatin structure
Date released
128
August, 2021
20
May, 2022
14
May, 2023
Available data
84
bed narrowPeak
64
xls
57
txt
bigWig
1
hic
Organism
162
Homo sapiens
Biosample type
162
tissue
Organ
142
kidney
20
liver
Project
162
AMP
Genome assembly (visualization)
75
GRCh38
1
hg19
Lab
1053
AMP-T2D consortium
314
Klaus Kaestner, Upenn
142
Katalin Susztak, Upenn
123
Kyle Gaulton, UCSD
47
KPMP
24
Bing Ren, UCSD
20
Karen Mohlke, UNC
19
Xin Sun, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
4
Anna Gloyn, Oxford
2
Mark McCarthy, Oxford
2
Struan F.A. Grant, CHOP
1
ITG
1
Maike Sander, UCSD
files.file_type!
bigWig
BIOSAMPLE
ASSAY
162 results
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ATAC-seq
total RNA-seq
single cell RNA-seq
snATAC-seq
Hi-C
tissue
kidney
75
49
11
6
1
liver
20
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