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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
12
ATAC-seq
4
total RNA-seq
1
pCHi-C
Assay category
12
DNA accessibility
4
Transcription
Date released
92
February, 2021
8
February, 2023
1
May, 2021
Available data
88
txt
66
bam
bigWig
58
tsv
8
bed narrowPeak
4
bed bed3
Organism
101
Homo sapiens
Biosample type
100
tissue
1
primary cell
Organ
270
pancreas
211
kidney
195
epithelium
149
heart
101
bone element
79
connective tissue
74
liver
61
vasculature
60
blood vessel
54
eye
47
artery
42
adipose tissue
39
brain
22
musculature of body
20
lung
16
skeleton
14
limb
8
blood
8
bodily fluid
5
gonad
5
ovary
5
vein
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
nerve
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
100
AMP
1
T1D
Genome assembly (visualization)
12
hg19
8
GRCh38
Lab
100
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
files.file_type!
bigWig
month_released!
December, 2017
target.investigated_as!
control
BIOSAMPLE
ASSAY
101 results
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RNA microarray
ATAC-seq
total RNA-seq
pCHi-C
tissue
bone element
84
acetabular part of hip bone
1
1
ilium
1
1
ischium
1
1
pubis
1
1
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primary cell
megakaryocyte
1
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