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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
42
ChIP-seq
17
pCHi-C
13
ATAC-seq
7
total RNA-seq
1
DNAme array
Assay category
42
DNA binding
13
DNA accessibility
7
Transcription
1
DNA methylation
Target of assay
24
histone
24
histone modification
12
broad histone mark
12
narrow histone mark
12
transcription factor
6
control
5
RNA binding protein
Date released
250
August, 2021
196
February, 2023
180
May, 2022
151
February, 2021
139
August, 2017
97
October, 2019
80
May, 2020
80
May, 2021
56
September, 2020
47
September, 2023
40
March, 2020
29
October, 2018
26
November, 2019
25
February, 2020
25
November, 2017
July, 2019
23
May, 2019
22
December, 2017
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
9
October, 2017
8
February, 2018
8
June, 2019
6
September, 2017
5
December, 2019
5
March, 2019
5
November, 2020
4
December, 2018
4
July, 2018
4
November, 2018
3
March, 2023
3
October, 2022
1
August, 2018
1
August, 2022
1
January, 2019
1
September, 2018
Available data
bigWig
272
bam
169
tsv
132
bed narrowPeak
90
tagAlign
2
bed bed3+
Organism
80
Homo sapiens
Biosample type
43
in vitro differentiated cells
35
primary cell
cell line
2
tissue
Organ
2
pancreas
1
bone element
1
bone marrow
1
connective tissue
1
epithelium
1
thymus
Project
63
AMP
17
T1D
Genome assembly (visualization)
13
GRCh38
13
hg19
Lab
60
Kyle Gaulton, UCSD
20
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
bigWig
month_released!
July, 2019
biosample_type!
cell line
BIOSAMPLE
ASSAY
80 results
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ChIP-seq
pCHi-C
ATAC-seq
total RNA-seq
DNAme array
in vitro differentiated cells
embryonic stem cell
37
5
pancreatic PP cell
1
primary cell
monocyte
1
1
13
1
1
naive thymus-derived CD4-positive, alpha-beta T cell
2
1
CD4-positive, alpha-beta T cell
2
neutrophil
1
1
B cell
1
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tissue
pancreas
1
thymus
1
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