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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
12
ATAC-seq
4
total RNA-seq
1
pCHi-C
Assay category
12
DNA accessibility
4
Transcription
Date released
92
February, 2021
8
February, 2023
1
May, 2021
Available data
88
txt
66
bam
bigWig
58
tsv
8
bed narrowPeak
4
bed bed3
Organism
101
Homo sapiens
Biosample type
100
tissue
1
primary cell
Organ
319
pancreas
222
epithelium
221
kidney
166
liver
164
heart
112
connective tissue
101
bone element
78
vasculature
77
blood vessel
65
adipose tissue
61
brain
56
artery
55
eye
31
limb
25
musculature of body
19
lung
16
skeleton
14
blood
14
bodily fluid
12
nerve
8
spleen
7
embryo
6
vein
4
gonad
4
ovary
1
bone marrow
1
lymph node
1
pericardium
1
pituitary gland
1
skin of body
1
spinal cord
1
thymus
Project
100
AMP
1
T1D
Genome assembly (visualization)
12
hg19
8
GRCh38
Lab
100
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
files.file_type!
bigWig
month_released!
March, 2020
audit.NOT_COMPLIANT.category!
missing controlled_by
BIOSAMPLE
ASSAY
101 results
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RNA microarray
ATAC-seq
total RNA-seq
pCHi-C
tissue
bone element
84
acetabular part of hip bone
1
1
ilium
1
1
ischium
1
1
pubis
1
1
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primary cell
megakaryocyte
1
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