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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
98
single cell RNA-seq
10
ATAC-seq
9
ChIP-seq
2
Capture-C
1
RNA microarray
Assay category
98
Transcription
10
DNA accessibility
9
DNA binding
Target of assay
8
control
1
broad histone mark
1
histone
1
histone modification
Date released
139
August, 2017
120
August, 2021
119
February, 2021
107
October, 2019
103
February, 2023
81
May, 2020
72
November, 2017
44
March, 2020
36
May, 2021
30
November, 2019
29
October, 2018
25
February, 2020
23
July, 2019
23
May, 2019
22
December, 2017
15
April, 2019
9
October, 2017
8
February, 2018
8
June, 2019
8
November, 2018
6
September, 2017
5
December, 2018
5
December, 2019
4
January, 2019
4
July, 2018
2
May, 2022
1
August, 2018
1
August, 2022
1
May, 2023
1
November, 2020
1
October, 2022
1
September, 2018
Available data
113
tsv
49
bam
bigWig
26
bed narrowPeak
24
tagAlign
3
bed bed3+
Organism
119
Homo sapiens
Biosample type
99
tissue
18
in vitro differentiated cells
2
cell line
1
primary cell
Organ
92
heart
6
blood vessel
6
vasculature
3
epithelium
2
artery
2
pancreas
1
adipose tissue
1
connective tissue
1
liver
Project
120
AMP
Genome assembly (visualization)
10
GRCh38
10
hg19
Lab
128
Katalin Susztak, Upenn
120
AMP-T2D consortium
22
Bing Ren, UCSD
2
Struan F.A. Grant, CHOP
Audit category:
2
inconsistent ontology term
files.file_type!
bigWig
BIOSAMPLE
ASSAY
120 results
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Clear Filters
single cell RNA-seq
ATAC-seq
ChIP-seq
Capture-C
RNA microarray
tissue
heart left ventricle
18
left cardiac atrium
18
right cardiac atrium
18
heart right ventricle
17
aorta
4
+ See 9 more…
in vitro differentiated cells
neural progenitor cell
10
8
cell line
EndoC_BH1
2
primary cell
hepatocyte
1
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