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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
RRBS
5
Hi-C
4
WGBS
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
19
DNA methylation
5
3D chromatin structure
4
Transcription
Date released
272
August, 2021
202
February, 2023
180
May, 2022
164
February, 2021
139
August, 2017
107
October, 2019
96
May, 2021
81
May, 2020
72
November, 2017
56
September, 2020
47
September, 2023
44
March, 2020
30
November, 2019
29
October, 2018
25
February, 2020
23
July, 2019
23
May, 2019
22
December, 2017
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
11
November, 2020
9
October, 2017
8
February, 2018
8
June, 2019
8
November, 2018
6
September, 2017
5
December, 2018
5
December, 2019
5
March, 2019
5
March, 2023
4
January, 2019
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
September, 2018
Available data
bigWig
82
bam
65
tsv
23
bed bedMethyl
23
bigBed bedMethyl
7
bed narrowPeak
4
bed bed3+
4
hdf5
2
bigBed narrowPeak
1
hic
Organism
24
Homo sapiens
Biosample type
14
tissue
10
primary cell
2
cell line
2
stem cell
Organ
6
epithelium
5
musculature of body
4
heart
4
kidney
4
limb
2
brain
2
liver
2
pancreas
2
vasculature
1
blood vessel
1
connective tissue
1
eye
1
pericardium
Project
23
AMP
4
community
1
ITG
Genome assembly (visualization)
15
hg19
1
GRCh38
Lab
23
AMP-T2D consortium
4
Anna Gloyn, Oxford
1
ITG
Audit category:
2
inconsistent ontology term
files.file_type!
bigWig
BIOSAMPLE
ASSAY
28 results
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Clear Filters
RRBS
Hi-C
WGBS
CRISPR RNA-seq
CRISPRi RNA-seq
shRNA RNA-seq
siRNA RNA-seq
tissue
gastrocnemius medialis
4
heart left ventricle
1
2
aorta
1
brain
1
islet of Langerhans
1
+ See 4 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
chondrocytes
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
+ See 5 more…
cell line
EndoC-BH1
1
1
stem cell
SB Ad3.1
1
1
See all biosamples
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