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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
ChIP-seq
17
pCHi-C
6
total RNA-seq
Assay category
37
DNA binding
6
Transcription
Target of assay
20
histone
20
histone modification
12
transcription factor
10
broad histone mark
10
narrow histone mark
5
RNA binding protein
5
control
Date released
178
May, 2022
152
August, 2021
99
February, 2023
60
May, 2021
56
September, 2020
47
September, 2023
45
February, 2021
19
April, 2020
16
January, 2021
14
May, 2023
10
November, 2020
5
March, 2019
5
March, 2023
3
October, 2022
Available data
bigWig
135
bam
114
bed narrowPeak
84
tagAlign
51
tsv
2
bed bed3+
Organism
60
Homo sapiens
Biosample type
42
in vitro differentiated cells
16
primary cell
2
tissue
Organ
1
bone element
1
bone marrow
1
connective tissue
1
pancreas
1
thymus
Project
43
AMP
17
T1D
Lab
60
Kyle Gaulton, UCSD
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
bigWig
lab.title!
AMP-T2D consortium
BIOSAMPLE
ASSAY
60 results
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ChIP-seq
pCHi-C
total RNA-seq
in vitro differentiated cells
embryonic stem cell
37
5
primary cell
CD4-positive, alpha-beta T cell
2
B cell
1
CD8-positive, alpha-beta T cell
1
activated CD4-positive, alpha-beta T cell
1
adult endothelial progenitor cell
1
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tissue
pancreas
1
thymus
1
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