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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
ChIP-seq
1
pCHi-C
1
snATAC-seq
Assay category
8
DNA binding
1
DNA accessibility
Target of assay
8
control
Date released
5
December, 2017
2
September, 2017
1
August, 2017
1
February, 2021
1
May, 2022
Available data
2799
bam
bigWig
1742
bed narrowPeak
1257
fastq
1122
tsv
1014
bigBed narrowPeak
376
tagAlign
312
bed broadPeak
276
bigBed broadPeak
246
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
33
bed bedMethyl
33
bigBed bedMethyl
23
hic
22
bedpe bed3+
8
csv
6
bed bed3
4
hdf5
4
tar
3
bed bedgraph
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
10
Homo sapiens
Biosample type
4
in vitro differentiated cells
4
tissue
1
cell line
1
stem cell
Organ
connective tissue
2
liver
2
pancreas
1
embryo
1
musculature of body
Project
10
AMP
Genome assembly (visualization)
10
hg19
8
GRCh38
Lab
10
AMP-T2D consortium
Audit category:
1
audit script error
files.file_type!
bigWig
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
10 results
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ChIP-seq
pCHi-C
snATAC-seq
in vitro differentiated cells
Posterior foregut
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
tissue
islet of Langerhans
2
liver
1
skeletal muscle tissue
1
cell line
HepG2
1
stem cell
hESC
1
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