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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
2
pCHi-C
1
ATAC-seq
Assay category
1
DNA accessibility
Date released
2
March, 2020
1
March, 2019
Available data
3075
bam
bigWig
1666
bed narrowPeak
1444
tsv
1101
fastq
966
bigBed narrowPeak
391
tagAlign
300
bed broadPeak
263
bigBed broadPeak
252
bed bed3+
161
txt
73
zippedFastqFolder
64
xls
30
bed bedMethyl
30
bigBed bedMethyl
18
bedpe bed3+
17
hic
12
bed bed3
8
csv
7
bed bedgraph
3
hdf5
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
3
Homo sapiens
Biosample type
2
in vitro differentiated cells
1
tissue
Organ
1
pancreas
Project
3
AMP
Genome assembly (visualization)
2
hg19
Lab
2
AMP-T2D consortium
1
Mark McCarthy, Oxford
Audit category:
2
inconsistent ontology term
files.file_type!
bigWig
organ_slims!
epithelium
BIOSAMPLE
ASSAY
3 results
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pCHi-C
ATAC-seq
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
tissue
islet of Langerhans
1
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