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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
71
ChIP-seq
Assay category
71
DNA binding
Target of assay
54
control
17
histone
17
histone modification
10
broad histone mark
7
narrow histone mark
Date released
August, 2017
23
May, 2020
21
November, 2017
9
October, 2019
8
October, 2017
7
August, 2021
3
February, 2021
Available data
2822
bam
bigWig
1541
bed narrowPeak
1355
tsv
927
bigBed narrowPeak
843
fastq
306
tagAlign
259
bed broadPeak
248
bigBed broadPeak
219
bed bed3+
161
txt
73
zippedFastqFolder
64
xls
24
bed bedMethyl
24
bigBed bedMethyl
18
bedpe bed3+
17
hic
12
bed bed3
8
csv
7
bed bedgraph
3
hdf5
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
71
Homo sapiens
Biosample type
61
tissue
7
in vitro differentiated cells
3
cell line
Organ
36
brain
24
liver
2
artery
2
blood vessel
epithelium
2
heart
2
vasculature
1
pancreas
Project
71
AMP
Genome assembly (visualization)
1
GRCh38
Lab
71
AMP-T2D consortium
Audit category:
1
missing controlled_by
files.file_type!
bigWig
organ_slims!
epithelium
month_released!
August, 2017
BIOSAMPLE
ASSAY
71 results
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ChIP-seq
tissue
liver
23
brain
8
cingulate gyrus
8
layer of hippocampus
4
substantia nigra
4
+ See 11 more…
in vitro differentiated cells
neural progenitor cell
7
cell line
smooth muscle cell of the coronary artery
2
iPSC derived cell line
1
See all biosamples
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