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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
50
ChIP-seq
14
total RNA-seq
13
ATAC-seq
4
pCHi-C
1
Hi-C
Assay category
50
DNA binding
14
Transcription
13
DNA accessibility
1
3D chromatin structure
Target of assay
27
control
23
histone
23
histone modification
23
narrow histone mark
Date released
229
August, 2021
106
August, 2017
101
February, 2021
95
February, 2023
82
October, 2019
47
September, 2023
46
May, 2022
29
March, 2020
29
October, 2018
25
February, 2020
25
November, 2017
23
May, 2020
22
May, 2019
21
November, 2019
19
April, 2020
15
April, 2019
15
May, 2023
13
July, 2019
12
December, 2017
9
October, 2017
8
January, 2021
6
September, 2017
5
March, 2019
4
December, 2018
4
July, 2018
4
November, 2020
3
December, 2019
3
November, 2018
2
May, 2021
1
August, 2022
1
January, 2019
Available data
186
bam
bigWig
151
bed narrowPeak
49
tagAlign
47
bigBed narrowPeak
8
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bedpe bed3+
1
hic
1
tagAlign bed3+
Organism
82
Homo sapiens
Biosample type
82
tissue
11
primary cell
10
cell line
4
in vitro differentiated cells
Organ
21
eye
17
limb
11
nerve
10
brain
5
artery
5
blood vessel
5
vasculature
4
gonad
4
ovary
3
pancreas
2
kidney
1
connective tissue
1
heart
1
lymph node
1
pituitary gland
1
skin of body
Project
82
AMP
Genome assembly (visualization)
3
hg19
2
GRCh38
Lab
82
AMP-T2D consortium
files.file_type!
bigWig
organ_slims!
pericardium
BIOSAMPLE
ASSAY
82 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
pCHi-C
Hi-C
tissue
islet of Langerhans
21
14
13
4
tibial nerve
11
tibial artery
5
kidney
2
central medial thalamic nucleus
1
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