Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
93
single cell RNA-seq
16
ChIP-seq
3
Hi-C
3
pCHi-C
2
RRBS
2
WGBS
2
total RNA-seq
Assay category
95
Transcription
16
DNA binding
4
DNA methylation
3
3D chromatin structure
Target of assay
16
control
Date released
92
August, 2021
10
April, 2019
5
March, 2020
4
July, 2019
4
May, 2019
2
February, 2020
2
June, 2019
1
February, 2023
1
October, 2019
Available data
135
bam
bigWig
113
tsv
98
bed narrowPeak
89
bigBed narrowPeak
28
bed bed3+
28
bed broadPeak
28
bigBed broadPeak
8
bed bedMethyl
8
bigBed bedMethyl
3
bedpe bed3+
3
hic
Organism
121
Homo sapiens
Biosample type
118
tissue
3
primary cell
Organ
323
pancreas
223
epithelium
223
kidney
169
heart
169
liver
114
connective tissue
101
bone element
vasculature
80
blood vessel
66
adipose tissue
64
brain
56
artery
55
eye
31
limb
28
musculature of body
20
lung
16
skeleton
14
blood
14
bodily fluid
12
nerve
9
spleen
8
embryo
7
vein
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
121
AMP
Genome assembly (visualization)
5
hg19
Lab
121
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
files.file_type!
bigWig
organ_slims!
vasculature
BIOSAMPLE
ASSAY
121 results
search-icon
table-tab-icon
Clear Filters
single cell RNA-seq
ChIP-seq
Hi-C
pCHi-C
RRBS
WGBS
total RNA-seq
tissue
heart left ventricle
18
6
1
1
1
2
heart right ventricle
17
2
1
1
right cardiac atrium
18
1
1
left cardiac atrium
18
aortic valve
4
+ See 9 more…
primary cell
cardiac fibroblast
2
1
See all biosamples
Download