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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
2
ATAC-seq
1
ChIP-seq
1
total RNA-seq
Assay category
2
DNA accessibility
1
DNA binding
1
Transcription
Target of assay
1
control
Date released
1
August, 2017
1
May, 2023
1
November, 2019
1
November, 2020
Available data
565
bam
bigWig
474
tsv
75
fastq
71
bed narrowPeak
25
bigBed narrowPeak
19
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
Organism
4
Homo sapiens
Biosample type
2
tissue
1
in vitro differentiated cells
1
primary cell
Organ
75
kidney
43
artery
43
blood vessel
43
heart
43
vasculature
24
pancreas
8
bone element
8
skeleton
6
limb
4
connective tissue
3
brain
3
liver
2
adipose tissue
2
epithelium
1
embryo
Project
4
AMP
Genome assembly (visualization)
22
hg19
4
GRCh38
Lab
4
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
bigWig
BIOSAMPLE
ASSAY
4 results
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ATAC-seq
ChIP-seq
total RNA-seq
tissue
adipose tissue
1
adipose tissue(adipose white tissue)
1
in vitro differentiated cells
adipocyte
1
primary cell
osteoblast
1
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