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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
ATAC-seq
3
Hi-C
2
RRBS
Assay category
8
DNA accessibility
3
3D chromatin structure
2
DNA methylation
Date released
8
February, 2021
2
July, 2019
2
March, 2020
1
October, 2019
Available data
182
bam
bigWig
113
bed narrowPeak
91
bigBed narrowPeak
70
tsv
27
bed bed3+
27
bed broadPeak
27
bigBed broadPeak
4
tagAlign
3
bedpe bed3+
3
hic
2
bed bedMethyl
2
bigBed bedMethyl
Organism
13
Homo sapiens
Biosample type
8
cell line
4
tissue
1
primary cell
Organ
51
pancreas
28
eye
26
epithelium
22
connective tissue
13
heart
12
bone element
12
skeleton
12
vasculature
11
blood vessel
8
artery
8
liver
6
limb
6
musculature of body
5
brain
5
kidney
3
adipose tissue
2
vein
1
embryo
1
pericardium
Project
13
AMP
Genome assembly (visualization)
43
GRCh38
13
hg19
Lab
13
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
bigWig
BIOSAMPLE
ASSAY
13 results
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ATAC-seq
Hi-C
RRBS
cell line
smooth muscle cell of the coronary artery
8
tissue
heart left ventricle
1
1
heart
1
heart right ventricle
1
primary cell
cardiac fibroblast
1
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