Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
69
ChIP-seq
1
Hi-C
1
RRBS
1
WGBS
Assay category
69
DNA binding
2
DNA methylation
1
3D chromatin structure
Target of assay
64
control
5
transcription factor
2
RNA binding protein
1
recombinant protein
Date released
47
November, 2017
13
December, 2017
10
August, 2017
1
December, 2018
1
November, 2018
Available data
681
bam
bigWig
465
fastq
407
bed narrowPeak
358
bigBed narrowPeak
165
tsv
86
tagAlign
63
bed broadPeak
63
bigBed broadPeak
13
bed bed3+
3
bed bedMethyl
3
bigBed bedMethyl
3
tar
1
bed bed3
1
bedpe bed3+
1
csv
1
hdf5
1
hic
Organism
72
Homo sapiens
Biosample type
49
cell line
22
tissue
1
in vitro differentiated cells
Organ
72
liver
30
pancreas
27
connective tissue
21
adipose tissue
15
epithelium
8
embryo
8
spleen
6
blood
6
bodily fluid
3
brain
2
musculature of body
Project
72
AMP
Genome assembly (visualization)
2
hg19
1
GRCh38
Lab
72
AMP-T2D consortium
Audit category:
1
missing controlled_by
files.file_type!
bigWig
BIOSAMPLE
ASSAY
72 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
Hi-C
RRBS
WGBS
cell line
HepG2
48
1
tissue
liver
17
1
1
right lobe of liver
3
in vitro differentiated cells
hepatocyte
1
Download