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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
43
ATAC-seq
23
ChIP-seq
6
single cell RNA-seq
3
Hi-C
3
total RNA-seq
1
RRBS
1
WGBS
1
pCHi-C
Assay category
23
DNA binding
Target of assay
20
control
3
histone
3
histone modification
2
broad histone mark
1
narrow histone mark
Date released
11
May, 2019
10
October, 2019
2
February, 2021
Available data
102
bam
bigWig
75
bed narrowPeak
71
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
6
fastq
6
tagAlign
Organism
23
Homo sapiens
Biosample type
16
tissue
5
primary cell
2
cell line
Organ
120
liver
78
connective tissue
57
pancreas
54
adipose tissue
46
brain
28
epithelium
23
blood vessel
23
vasculature
20
heart
18
limb
13
kidney
12
musculature of body
11
nerve
9
artery
8
embryo
8
spleen
6
blood
6
bodily fluid
5
vein
4
gonad
4
ovary
3
eye
1
lymph node
Project
23
AMP
Lab
23
AMP-T2D consortium
files.file_type!
bigWig
BIOSAMPLE
ASSAY
23 results
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ChIP-seq
tissue
tibial artery
5
thoracic aorta
4
ascending aorta
3
aorta
2
coronary artery
2
primary cell
endothelial cell of umbilical vein
5
cell line
smooth muscle cell of the coronary artery
2
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