Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
ChIP-seq
2
Hi-C
1
RRBS
Assay category
5
DNA binding
2
3D chromatin structure
1
DNA methylation
Target of assay
3
histone
3
histone modification
2
broad histone mark
2
control
1
narrow histone mark
Date released
6
October, 2019
1
July, 2019
1
March, 2020
Available data
32
bam
bigWig
21
bed narrowPeak
21
bigBed narrowPeak
12
bed broadPeak
12
bigBed broadPeak
8
bed bed3+
6
fastq
2
hdf5
2
hic
2
tsv
1
bed bedMethyl
1
bedpe bed3+
1
bigBed bedMethyl
1
tar
Organism
8
Homo sapiens
Biosample type
63
tissue
10
cell line
8
primary cell
Organ
175
epithelium
154
pancreas
8
blood
8
bodily fluid
8
kidney
8
vasculature
7
blood vessel
7
connective tissue
7
vein
3
heart
3
liver
3
musculature of body
2
eye
1
bone element
1
bone marrow
1
brain
Project
8
AMP
Genome assembly (visualization)
3
hg19
Lab
8
AMP-T2D consortium
Audit category:
1
audit script error
files.file_type!
bigWig
BIOSAMPLE
ASSAY
8 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
Hi-C
RRBS
primary cell
endothelial cell of umbilical vein
5
2
choroid plexus epithelial cell
1
Download