Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ATAC-seq
16
ChIP-seq
6
single cell RNA-seq
3
total RNA-seq
1
Hi-C
1
WGBS
1
pCHi-C
Assay category
35
DNA accessibility
16
DNA binding
9
Transcription
1
3D chromatin structure
1
DNA methylation
Target of assay
16
control
Date released
35
February, 2023
11
May, 2019
6
August, 2021
5
October, 2019
3
February, 2020
2
March, 2020
1
July, 2019
Available data
100
bed narrowPeak
87
bam
bigWig
62
bigBed narrowPeak
14
tsv
5
bed bed3+
5
bed broadPeak
5
bigBed broadPeak
1
bed bedMethyl
1
bedpe bed3+
1
bigBed bedMethyl
1
hic
Organism
63
Homo sapiens
Biosample type
63
tissue
10
cell line
8
primary cell
Organ
208
kidney
156
heart
132
pancreas
100
bone element
96
liver
66
connective tissue
65
adipose tissue
63
blood vessel
63
brain
63
vasculature
53
eye
46
artery
31
limb
25
musculature of body
20
lung
16
skeleton
15
epithelium
12
nerve
9
spleen
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
63
AMP
Genome assembly (visualization)
35
GRCh38
1
hg19
Lab
63
AMP-T2D consortium
files.file_type!
bigWig
BIOSAMPLE
ASSAY
63 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
ChIP-seq
single cell RNA-seq
total RNA-seq
Hi-C
WGBS
pCHi-C
tissue
coronary artery
35
2
1
aorta
2
4
1
1
1
tibial artery
5
1
ascending aorta
3
1
thoracic aorta
4
+ See 1 more…
See all biosamples
Download