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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
19
total RNA-seq
4
pCHi-C
1
ChIP-seq
Assay category
28
DNA accessibility
19
Transcription
1
DNA binding
DNA methylation
Target of assay
histone
2
histone modification
2
narrow histone mark
1
control
Date released
31
February, 2023
19
October, 2019
1
February, 2020
1
June, 2019
Available data
32
bed narrowPeak
6
bam
5
bigBed narrowPeak
bigWig
5
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
52
Homo sapiens
Biosample type
51
tissue
1
primary cell
Organ
265
pancreas
219
kidney
167
epithelium
165
heart
143
liver
101
bone element
76
blood vessel
76
vasculature
66
connective tissue
56
artery
52
eye
41
brain
32
adipose tissue
30
limb
20
lung
17
musculature of body
16
skeleton
14
blood
14
bodily fluid
12
nerve
9
spleen
7
embryo
4
vein
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
52
AMP
Genome assembly (visualization)
27
hg19
Lab
52
AMP-T2D consortium
files.file_type!
bigWig
target.investigated_as!
histone
assay_slims!
DNA methylation
BIOSAMPLE
ASSAY
52 results
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ATAC-seq
total RNA-seq
pCHi-C
ChIP-seq
tissue
islet of Langerhans
1
14
4
retina
15
3
pigmented layer of retina
12
2
primary cell
retinal pigment epithelial cell
1
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