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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
53
total RNA-seq
13
single cell RNA-seq
1
MPRA
Assay category
66
Transcription
Date released
89
February, 2021
57
August, 2021
May, 2022
4
February, 2023
1
October, 2022
Available data
2584
bam
bigWig
1600
tsv
1105
fastq
929
bed narrowPeak
651
bigBed narrowPeak
257
bed broadPeak
255
bigBed broadPeak
247
bed bed3+
154
txt
77
tagAlign
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
19
zippedFastqFolder
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
vcf
Organism
150
Homo sapiens
Biosample type
150
tissue
1
cell line
Organ
88
bone element
62
kidney
4
skeleton
Project
151
AMP
Lab
94
AMP-T2D consortium
57
Katalin Susztak, Upenn
Audit category:
84
inconsistent ontology term
5
audit script error
files.file_type!
bigWig
target.investigated_as!
histone
month_released!
May, 2022
BIOSAMPLE
ASSAY
151 results
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RNA microarray
total RNA-seq
single cell RNA-seq
MPRA
tissue
bone element
84
kidney
49
13
acetabular part of hip bone
1
ilium
1
ischium
1
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cell line
MIN6
1
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