Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
57
ATAC-seq
41
WGBS
34
single cell RNA-seq
total RNA-seq
22
snATAC-seq
Assay category
79
DNA accessibility
41
DNA methylation
34
Transcription
Date released
213
August, 2021
164
February, 2021
154
May, 2022
139
August, 2017
109
February, 2023
93
October, 2019
79
May, 2020
77
May, 2021
68
November, 2017
47
September, 2023
42
March, 2020
40
September, 2020
30
November, 2019
29
October, 2018
23
July, 2019
23
May, 2019
22
December, 2017
19
April, 2020
16
January, 2021
14
April, 2019
14
May, 2023
11
November, 2020
9
October, 2017
8
February, 2018
8
June, 2019
7
November, 2018
6
September, 2017
5
December, 2018
5
December, 2019
5
March, 2019
5
March, 2023
4
January, 2019
4
October, 2022
1
August, 2018
1
August, 2022
1
September, 2018
Available data
134
zippedFastqFolder
38
bed narrowPeak
bigWig
18
bam
18
fastq
1
bed bed3+
1
txt
Organism
154
Homo sapiens
Biosample type
134
primary cell
20
tissue
Organ
98
pancreas
80
epithelium
2
musculature of body
Project
134
HPAP
20
AMP
Genome assembly (visualization)
19
hg19
Lab
134
Klaus Kaestner, Upenn
18
Kyle Gaulton, UCSD
2
AMP-T2D consortium
Audit category:
1
audit script error
files.file_type!
bigWig
target.investigated_as!
transcription factor
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
154 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
WGBS
single cell RNA-seq
snATAC-seq
primary cell
Langerhans cell
33
21
pancreatic alpha cell
22
25
pancreatic beta cell
13
16
pancreatic acinar cell
4
tissue
islet of Langerhans
18
skeletal muscle tissue
1
1
Download