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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
ATAC-seq
3
Hi-C
1
RRBS
Assay category
8
DNA accessibility
3
3D chromatin structure
1
DNA methylation
Date released
8
February, 2021
2
March, 2020
1
July, 2019
1
October, 2019
Available data
150
bam
bigWig
88
bed narrowPeak
77
bigBed narrowPeak
58
tsv
14
bed broadPeak
14
bigBed broadPeak
12
bed bed3+
4
fastq
3
hic
2
bedpe bed3+
2
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
Organism
12
Homo sapiens
Biosample type
8
cell line
3
primary cell
1
tissue
Organ
51
pancreas
28
eye
26
epithelium
22
connective tissue
13
heart
12
bone element
12
skeleton
12
vasculature
11
blood vessel
8
artery
8
liver
6
limb
6
musculature of body
5
brain
5
kidney
3
adipose tissue
2
vein
1
embryo
1
pericardium
Project
12
AMP
Genome assembly (visualization)
43
GRCh38
12
hg19
Lab
12
AMP-T2D consortium
Audit category:
1
audit script error
files.file_type!
bigWig
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
12 results
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ATAC-seq
Hi-C
RRBS
cell line
smooth muscle cell of the coronary artery
8
primary cell
endothelial cell of umbilical vein
2
choroid plexus epithelial cell
1
tissue
aorta
1
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