Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
474
total RNA-seq
153
ChIP-seq
25
ATAC-seq
9
DNase-seq
6
WGBS
5
pCHi-C
4
single cell RNA-seq
3
small RNA-seq
2
Capture-C
1
Hi-C
1
RNA microarray
1
RRBS
Assay category
9
DNA accessibility
Date released
6
June, 2019
1
August, 2017
1
November, 2018
1
November, 2020
Available data
9
bam
9
bed broadPeak
9
bed narrowPeak
9
bigBed broadPeak
9
bigBed narrowPeak
9
bigWig
8
bed bed3+
2
fastq
Organism
9
Homo sapiens
Biosample type
6
primary cell
2
tissue
1
in vitro differentiated cells
Organ
81
kidney
36
limb
33
musculature of body
32
brain
30
heart
19
epithelium
18
ureter
11
vasculature
9
blood vessel
9
connective tissue
8
pancreas
6
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
9
AMP
Genome assembly (visualization)
9
GRCh38
8
hg19
Lab
9
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
cool
audit.ERROR.category!
inconsistent replicate
BIOSAMPLE
ASSAY
9 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
primary cell
cardiac fibroblast
3
brain pericyte
1
hepatic stellate cell
1
osteoblast
1
tissue
omental fat pad
2
in vitro differentiated cells
adipocyte
1
Download