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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
10
total RNA-seq
5
single cell RNA-seq
1
MPRA
Assay category
15
Transcription
Date released
89
February, 2021
6
May, 2022
4
February, 2023
1
October, 2022
Available data
394
bam
350
fastq
198
tsv
160
tagAlign
155
bed narrowPeak
153
bigWig
153
zippedFastqFolder
100
txt
79
bigBed narrowPeak
24
bed broadPeak
23
bed bed3+
23
bigBed broadPeak
17
bed bedMethyl
17
bigBed bedMethyl
8
csv
2
bedpe bed3+
1
hic
1
vcf
Organism
99
Homo sapiens
Biosample type
99
tissue
1
cell line
Organ
88
bone element
6
pancreas
5
kidney
4
skeleton
Project
100
AMP
Genome assembly (visualization)
hg19
Lab
94
AMP-T2D consortium
Katalin Susztak, Upenn
6
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
5
audit script error
files.file_type!
cool
assembly!
hg19
lab.title!
Katalin Susztak, Upenn
BIOSAMPLE
ASSAY
100 results
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RNA microarray
total RNA-seq
single cell RNA-seq
MPRA
tissue
bone element
84
islet of Langerhans
6
kidney
5
acetabular part of hip bone
1
ilium
1
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cell line
MIN6
1
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